RIT researchers highlight the changing connectivity of the Amazon rainforest to global climate

The Amazon rainforest is one of the largest ecosystems in the world, and its climate is changing due to warming and deforestation. Researchers from Rochester Institute of Technology studied the region’s connectivity to the global climate crisis.
Photo Credit: Arın Turkay

The Amazon rainforest is one of the largest ecosystems in the world, and its climate is changing due to warming and deforestation. Researchers from Rochester Institute of Technology studied the region’s connectivity to the global climate crisis.

The Amazon rainforest is a unique region where climatologists have studied the effects of warming and deforestation for decades. With the global climate crisis becoming more evident, a new study is linking the Amazon to climate change around the rest of the world.

Scholars at Rochester Institute of Technology have looked at the issue from a mathematical perspective and have reinforced the idea that the Amazon’s climate is very much connected to the global climate system and that the connectivity is reconfiguring.

Mathematical modeling Ph.D. student Adam Giammarese ’21 BS/MS (applied mathematics) and Assistant Professor Nishant Malik recently had their findings published as a featured article in Chaos: An Interdisciplinary Journal of Nonlinear Science. Giammarese began the work as part of RIT’s Research Experience for Undergraduates (REU) program, along with co-author Jacob Brown.

The team used both old and new approaches to climate network analysis for their research, analyzing decades of temperature data.

Mice study suggests metabolic diseases may be driven by gut microbiome, loss of ovarian hormones

Mice that received fecal implants from donors that had their ovaries removed gained more fat mass and had greater expression of liver genes associated with inflammation, Type 2 diabetes, fatty liver disease and atherosclerosis. The findings may shed light on the greater incidence of metabolic dysfunction in postmenopausal women. The team members included, from left: molecular and integrative physiology professor Erik R. Nelson; Kelly Swanson, the director of the Division of Nutritional Sciences and the Kraft Heinz Endowed Professor in Human Nutrition; and animal sciences professor Brett R. Loman.
  Photo Credit: Fred Zwicky

The gut microbiome interacts with the loss of female sex hormones to exacerbate metabolic disease, including weight gain, fat in the liver and the expression of genes linked with inflammation, researchers found in a new rodent study.

The findings, published in the journal Gut Microbes, may shed light on why women are at significantly greater risk of metabolic diseases such as obesity and Type 2 diabetes after menopause, when ovarian production of female sex hormones diminishes.

“Collectively, the findings demonstrate that removal of the ovaries and female hormones led to increased permeability and inflammation of the gut and metabolic organs, and the high-fat diet exacerbated these conditions,” said Kelly S. Swanson, the director of the Division of Nutritional Sciences and the Kraft Heinz Endowed Professor in Human Nutrition at the University of Illinois Urbana-Champaign who is a corresponding author of the paper.  “The results indicated that the gut microbiome responds to changes in female hormones and worsens metabolic dysfunction.”

Stopping the awakening of leukemia stem cells to prevent relapse

Acute Myeloid Leukemia
Image Credit: National Cancer Institute

Why myeloid leukemias start to grow again after chemotherapy has killed the bulk of cancerous cells, and how growth may be blocked by repurposed drugs, may have been solved by new research.

The bone marrow of Acute Myeloid Leukemia (AML) patients contains a rare population of leukemic stem cells (LSCs) that do not grow and, therefore, are not killed by chemotherapy.

However, after treatment, these cells start to grow and produce AML cells, but it has until now been unclear as to what kick-starts this process.

In a new study, published in Nature Communications, experts from Newcastle University, the University of Birmingham and the Princess Maxima Centre of Pediatric oncology, studied single cells from patients with t(8;21) AML to investigate what made the rare LSCs grow.

Graphene research: numerous products, no acute dangers

The "Graphene Flagship" initiative has investigated the effects of graphene (blue) and related materials on health and the environment. Colored scanning electron microscopy
Image Credit: Empa

The largest EU research initiative ever launched has come to a successful end: The Graphene Flagship was officially concluded at the end of last year. Empa researchers were also involved, such as molecular biologist Peter Wick, who was part of the Health and Environment work package from the very beginning – and has just summarized the findings in this area with international colleagues in a comprehensive review article in the specialist journal ACS Nano.

Think big. Despite its research topic, this could well be the motto of the Graphene Flagship, which was launched in 2013: With an overall budget of one billion Euros, it was Europe's largest research initiative to date, alongside the Human Brain Flagship, which was launched at the same time. The same applies to the review article on the effects of graphene and related materials on health and the environment, which Empa researchers Peter Wick and Tina Bürki just published together with 30 international colleagues in the scientific journal ACS Nano; on 57 pages, they summarize the findings on the health and ecological risks of graphene materials, the reference list includes almost 500 original publications.

Caring glass frog fathers have smaller testes

Males of the glassfrog species Hyalinobatrachium valerioi are very dedicated fathers.
Photo Credit: © Francesca Angiolani

An international team of researchers including the University of Bern shows in a new study that male glass frogs that care for their offspring have smaller testes than males of species that do not provide any brood care. This indicates an evolutionary trade-off between sperm production and parenting.

Living in the tropical rainforests of Central and South America, frogs of the glass frog family are fascinating because of their transparent skin on their belly, which reveals their internal organs. However, it is not only the appearance of these amphibians that is remarkable, but also their social behavior. In many - but not all - glass frog species, the males remain with the clutch after mating and guard and care for their offspring. In a new study, an international team, including researchers from the Institute of Ecology and Evolution at the University of Bern, shows that there is a link between this paternal care and the testes size of glass frogs. The results were recently published in the journal Proceedings of the Royal Society B.

Long COVID linked to persistently high levels of inflammatory protein: a potential biomarker and target for treatments

"We hope that this could help to pave the way to develop therapies and give some patients a firm diagnosis," -Benjamin Krishna
Photo Credit: Annie Spratt

SARS-CoV-2 triggers the production of the antiviral protein IFN-γ, which is associated with fatigue, muscle ache and depression. New research shows that in Long COVID patients, IFN-y production persists until symptoms improve, highlighting a potential biomarker and a target for therapies.

A University of Cambridge-led study identifies the protein interferon gamma (IFN-γ) as a potential biomarker for Long COVID fatigue and highlights an immunological mechanism underlying the disease, which could pave the way for the development of much needed therapies, and provide a head start in the event of a future coronavirus pandemic. 

The study, published today in Science Advances, followed a group of patients with Long COVID fatigue for over 2.5 years, to understand why some recovered and others did not. 

Long COVID continues to affect millions of people globally and is placing a major burden on health services. An estimated 1.9 million people in the UK alone (2.9% of the population) were experiencing self-reported Long COVID as of March 2023, according to the ONS. Fatigue remains by far the most common and debilitating symptom and patients are still waiting for an effective treatment.

Researchers reveal mechanism of drug reactivating tumor suppressors

Mechanism of methylated-histone inhibitor valemetostat
Researchers revealed the mechanism of the cancer drug valemetostat and established its efficacy in treating adult T-cell leukemia/lymphoma (ATL).
Illustration Credit: ©2024 Makoto Yamagishi, The University of Tokyo

Researchers have revealed the mechanism of a drug shown to be effective in treating certain types of cancer, which targets a protein modification silencing the expression of multiple tumor suppressor genes. They also demonstrated in clinical trials the efficacy of the drug in reducing tumor growth in blood cancer. The findings could lead to longer-term treatments for the disease and therapies for other types of cancer with similar underlying causes.

A team of researchers from the University of Tokyo and their collaborators focused on therapies targeting H3K27me3, a modification on a DNA-packaging histone protein, which plays a large role in regulating gene expression. The modification occurs when methyl groups, each consisting of three hydrogen atoms bonded to a single carbon atom (CH3), are added to the protein in a process called methylation.

The modification, also referred to as being epigenetic (a heritable change in gene function that occurs without altering the sequence of the DNA), has been tied to the repression, or reducing the expression, of tumor suppressor genes, with the accumulation of the methylated histones around the genes.

Baleen whales evolved a unique larynx to communicate

humpback whales
Image Credit: Jeanette Atherton AI generated.

The new results also make it clear that human noise in the oceans severely restricts the animals

The iconic baleen whales, such as the blue, gray and humpback whale, depend on sound for communication in the vast marine environment where they live. However, ever since whale song were first discovered more than 50 years ago, it remained unknown how baleen whales produce their complex vocalizations – until now. A team led by the voice scientists Coen Elemans from the University of Southern Denmark and Tecumseh Fitch from the University of Vienna has now for the first time found that baleen whales evolved novel structures in their larynx to make their vast array of underwater songs. The study was published in the prestigious journal Nature. 

Baleen whales are the largest animals to have ever roamed our planet and as top predators play a vital role in marine ecosystems. To communicate across vast distances and find each other, baleen whales depend critically on the production of sounds that travels far in murky and dark oceans. 

A new study in the prestigious journal Nature reports that baleen whales evolved unique structures in their larynx that enable their low-frequency vocalizations, but also limit their communication range.

"The toothed and baleen whales evolved from land mammals that had a larynx serving two functions: protecting the airways and sound production. However, their transition to aquatic life placed new and strict demands on the larynx to prevent choking underwater.", says Tecumseh Fitch. 

How Does the Brain Make Decisions?

Image Credit: Generated by HM News with AI in Adobe Firefly

Scientific Frontline: Extended "At a Glance" Summary: Neural Circuitry of Decision-Making

The Core Concept: The brain finalizes decisions through a structural process where selecting one option actively suppresses the neural pathways associated with alternative options. This mechanism involves specific sequences of neuronal activation that lock in a choice and prevent a change of mind.

Key Distinction/Mechanism: During navigational decision-making, a specific set of excitatory neurons associated with a chosen action (e.g., turning right) fires and subsequently activates a targeted set of inhibitory neurons. These inhibitory cells then curb the activity of the neurons associated with the opposite action (e.g., turning left). This functional architecture within the posterior parietal cortex serves to stabilize the committed decision.

Major Frameworks/Components:

• Connectomics: The comprehensive structural mapping of the wiring and connections between neurons using powerful microscopy.
• Functional Behavioral Analysis: The use of virtual reality mazes to record real-time neuronal activity and decision-making dynamics in active subjects.
• Posterior Parietal Cortex: The specific brain region studied, functioning as an "integrative hub" that receives and processes multisensory information to guide navigational choices.
• Synaptic Wiring Motifs: The specific, rule-based interactions between excitatory and inhibitory neurons that provide the foundation for the brain’s computational processes.

Possible trigger for autoimmune diseases discovered

 One of the great mysteries of immunology: the function of B cells (green) in the thymus gland was previously unknown. Researchers have now been able to show that the immune cells help to prevent T cells from attacking the body.
Image Credit: Jan Böttcher, Thomas Korn / TUM

Immune cells must learn not to attack the body itself. A team of researchers from the Technical University of Munich (TUM) and the Ludwig Maximilian University of Munich (LMU) has discovered a previously unknown mechanism behind this: other immune cells, the B cells, contribute to the "training" of the T cells in the thymus gland. If this process fails, autoimmune diseases can develop.

In children and adolescents, the thymus gland functions as a "school for T cells". The organ in our chest is where the precursors of those T cells that would later attack the body's own cells are discarded. Epithelial cells in the thymus present a large number of molecules that occur in the body to the future T cells. If any of them reacts to one of these molecules, a self-destruction program is triggered. T cells that attack the body's own molecules remaining intact and multiplying, on the other hand, can cause autoimmune diseases.

New mechanism discovered

In Nature, the team led by Thomas Korn, Professor of Experimental Neuroimmunology at TUM and a Principal Investigator in the SyNergy Cluster of Excellence, and Ludger Klein, Professor of Immunology at LMU’s Biomedical Center (BMC), describe another previously unknown mechanism behind this.

In addition to the precursors of T cells, the thymus gland also contains other immune cells, the B cells. They develop in the bone marrow but migrate to the thymus in early childhood. "The function of B cells in the thymus gland has been a mystery that has puzzled immunologists for many years," says Thomas Korn. The researchers have now been able to show for the first time that B cells play an active role in teaching T cells which targets not to attack.