. Scientific Frontline

Friday, November 11, 2022

Friendly monkeys have friendly microbes


More sociable monkeys have a higher abundance of certain beneficial gut bacteria, and a lower abundance of potentially disease-causing bacteria, new research has found.

The study involved analyzing social network data from a population of non-captive macaques on the island of Cayo Santiago, off Puerto Rico, and combining this with sequencing data to assess their individual gut microbiota.

The researchers found that monkeys that engage in social interactions were more likely to have an abundance of gut microbes that are known to benefit the immune system, and were less likely to have an abundance of potentially harmful bacteria. The analyses controlled for other factors that could affect the microbiome, including age, season, sex and rank within the group’s hierarchy.

The study was conducted by Dr Katerina Johnson at the University of Oxford's Department of Psychiatry, in collaboration with Dr Karli Watson from the University of Colorado Boulder, alongside Oxford professors Robin Dunbar and Philip Burnet.

Linking Mass Extinctions to the Expansion and Radiation of Land Plants

Ymer Island, Greenland, during the collection of the Heintzbjerg sample sequence used in this study. In the foreground looking down the slope is the Zoologdalen Formation. The body of water is the Dusen Fjord, which separates the northern and southern portions of Ymer Island.
Photo Credit: John Marshall, University of Southampton.

The Devonian Period, 419 to 358 million years ago, was one of the most turbulent times in Earth’s past and was marked by at least six significant marine extinctions, including one of the five largest mass extinctions ever to have occurred. Additionally, it was during the Devonian that trees and complex land plants similar to those we know today first evolved and spread across the landscape. This evolutionary advancement included the development of significant and complex root systems capable of affecting soil biogeochemistry on a scale the ancient Earth had yet to experience.

It has been theorized that these two seemingly separate events, marine extinctions and plant evolution and expansion, were intricately linked in the Devonian. Specifically, it has been proposed that plant evolution and root development occurred so rapidly and on such a massive scale that nutrient export from the land to the ancient oceans would have drastically increased. This scenario is seen in modern systems where anthropogenically sourced nutrient export has vastly increased the nutrient load into areas such as the Gulf of Mexico and the Great Lakes, leading to large-scale algal blooms that ultimately deplete the oxygen in the water column. This effect, known as eutrophication, magnified on a global scale, would have been catastrophic to ancient oceans, fueling algal blooms that would have depleted most of the ocean’s oxygen.

Breathing may measurably modulate neural responses across brain

Wenyu Tu, co-author on the eLife paper and doctoral student in neuroscience in the Huck Institutes of the Life Sciences, sets up a functional MRI experiment. Functional MRI was used in conjunction with neuronal electrophysiology to identify a link between respiration and neural activity changes.
Photo Credit: Kelby Hochreither/Penn State

Mental health practitioners and meditation gurus have long credited intentional breathing with the ability to induce inner calm, but scientists do not fully understand how the brain is involved in the process. Using functional magnetic resonance imaging (fMRI) and electrophysiology, researchers in the Penn State College of Engineering identified a potential link between respiration and neural activity changes in rats.

Their results were made available online ahead of publication in eLife. The researchers used simultaneous multi-modal techniques to clear the noise typically associated with brain imaging and pinpoint where breathing regulated neural activity.

“There are roughly a million papers published on fMRI — a non-invasive imaging technique that allows researchers to examine brain activity in real time,” said Nanyin Zhang, founding director of the Penn State Center for Neurotechnology in Mental Health Research and professor of biomedical engineering. “Imaging researchers used to believe that respiration is a non-neural physiological artifact, like a heartbeat or body movement, in fMRI imaging. Our paper introduces the idea that respiration has a neural component: It affects the fMRI signal by modulating neural activity.”

By scanning the brainwaves of rodents in a resting state under anesthesia using fMRI, researchers revealed a network of brain regions involved in respiration.

Scientists Created Model to Determine Risks of Sudden Cardiac Arrest

According to Maksim Kashtanov, Sverdlovsk doctors perform 20-30 operations a year for this genetic disease.
Photo Credit: from Maksim Kashtanov's personal archive

European and Russian scientists have developed a model for predicting the risks of sudden cardiac arrest after alcohol septal ablation (ASA) for hypertrophic obstructive cardiomyopathy (HOCM). In other words, after surgery to remove a hypertrophic fragment of the left ventricular septum, which prevents normal blood flow to the aorta. The created model is a new word in science: before that the regularities of sudden cardiac arrest after ASA have not been investigated, the modern system of risk assessment for postoperative patients was absent. Meanwhile, HOCM is the cause of 30% of cases of sudden cardiac arrest.

The researchers' recommendations will contribute to the timely identification of patients at risk of sudden cardiac arrest after alcohol septal ablation and to the most effective treatment of hypertrophic obstructive cardiomyopathy. An article about the research was published in the American Journal of Cardiology.

The researchers analyzed the medical histories of more than 1,830 patients seen in clinics in Germany, the Czech Republic, Denmark, the Netherlands, Great Britain, and Russia. The analysis covered the period from 1996 to 2021. The study is the most extensive and in-depth to date. In developing the model, the authors used Russian statistics that have been forming since 2001. Data from Russia - Ekaterinburg and St. Petersburg - accounted for one-third of the statistical base of the study.

Thursday, November 10, 2022

Rejuvenated immune cells can improve clearance of toxic waste from brain

Scientific Frontline: "At a Glance" Summary

  • Main Discovery: Researchers determined that specialized immune cells surrounding the brain, known as parenchymal border macrophages, control the fluid flow responsible for sweeping toxic waste from the brain, and that rejuvenating these cells in older subjects restores efficient waste clearance.
  • Methodology: Scientists examined the cerebrospinal fluid flow in mice by depleting and impairing their border macrophages, which predictably caused neurological debris to accumulate. They subsequently treated aged mice with an immune-stimulating protein to successfully restore macrophage activity and normalize fluid dynamics.
  • Key Data: Human brain fluid flow naturally begins to decline at approximately age 50, a physiological phenomenon mirrored in older mice, which exhibit a severe scarcity of the specific border macrophages necessary for efficient waste clearance.
  • Significance: This discovery reveals a highly accessible therapeutic target for neurodegenerative conditions, shifting the scientific focus from attempting to revive dead or dying neurons to modifying the immune cells located on the brain's periphery.
  • Future Application: Pharmacological treatments that target, boost, or replace parenchymal border macrophages could be utilized to slow, delay, or prevent the progression of Alzheimer’s disease, Parkinson’s, and multiple sclerosis.
  • Branch of Science: Neuroscience and Neuroimmunology

Study provides first snapshot of global experiences with water insecurity

A new study by Northwestern anthropologists reveals the life-altering problems with water that have long gone hidden. 
Photo Credit: Charles Nambasi

Countries in Latin America, Asia and Africa have experienced severe droughts and unprecedented floods in the last year. New research from Northwestern University is the first to provide a more nuanced and global view of the experience of water insecurity.

In a new study published in The Lancet Planetary Health, scientists estimate that 436 million of the 3 billion adults represented by the survey sample were water insecure in 2021. The researchers also were able to pinpoint which groups experience the highest rates of water insecurity.

The study, led by Northwestern anthropologist Sera Young, uses data drawn from a nationally representative sample of nearly half the world’s population and a scale designed to measure water insecurity more holistically.

Young is an associate professor of anthropology and global health studies at Weinberg College of Arts and Sciences and a faculty fellow at the Institute for Policy Research (IPR) at Northwestern. Study collaborators include Hilary Bethancourt, assistant research professor of anthropology and IPR at Northwestern.

“These data bring a human face to the water sector, thereby revealing life-altering problems with water that have long gone hidden,” Young said.

Five times more rangers needed to manage protected areas worldwide by 2030

Ranger in Patagonia National Park, Chile.
Photo Credit: Jan Vincent Kleine, Rewilding Chile

The first study of its kind outlines an urgent need for larger numbers and better-supported protected area staff to ensure the health of life on Earth. In a new scientific paper published in Nature Sustainability, an international team of scientists, including one from University of Hawaiʻi at Mānoa, argue that there are not enough rangers and other staff to manage the current protected areas around the world. This is the first estimate of the global number of protected area personnel since 1999 and the first to specifically include rangers.

The study comes ahead of the global meeting of the Conference of the Parties in Montréal, Canada, December 7–15, which decides new targets for conservation. The authors urge governments, donors, private landowners and non-governmental organizations to increase the numbers of rangers and other staff five-fold in order to meet global biodiversity conservation goals that have economic, cultural and ecosystem benefits.

“Sufficient staffing is fundamental to the success of conservation initiatives,” said Eleanor Sterling, study co-author and director of the Hawaiʻi Institute of Marine Biology in the UH Mānoa School of Ocean and Earth Science and Technology (SOEST). “Protected area personnel have a critical role to play in ensuring implementation of this conservation strategy honors local and national values.”

The World Will Probably Warm Beyond the 1.5-Degree Limit. But Peak Warming Can Be Curbed.

More ambitious climate pledges could bring net-zero carbon dioxide emissions within this century, according to new research. Such a path is marked by rapid transformations throughout the global energy system and the scaling up of low-carbon technologies like renewables, nuclear energy, as well as carbon capture and storage, said the new study's authors.   
Photo Credit: Andrea Starr | Pacific Northwest National Laboratory

The world’s current climate pledges are insufficient to keep the goal of the 2015 Paris Agreement firmly within grasp. Global warming will likely surpass the 1.5-degree Celsius limit.

We are going to overshoot.

But countries can curb time spent in a warmer world by adopting more ambitious climate pledges and decarbonizing faster, according to new research led by scientists at the Department of Energy’s Pacific Northwest National Laboratory, the University of Maryland and the U.S. Environmental Protection Agency. Doing so, they warn, is the only way to minimize the overshoot.

While exceeding the 1.5-degree limit appears inevitable, the researchers chart several potential courses in which the overshoot period is shortened, in some cases by decades. The study published today in the journal Nature Climate Change, during the 2022 United Nations Climate Change Conference, also known as COP27, held in Sharm El Sheikh, Egypt.

“Let’s face it. We are going to breach the 1.5 degrees limit in the next couple of decades,” said corresponding author and PNNL scientist Haewon McJeon. “That means we’ll go up to 1.6 or 1.7 degrees or above, and we’ll need to bring it back down to 1.5. But how fast we can bring it down is key.”

Deforestation and grassland conversion are the biggest causes of biodiversity loss

Researchers rank the main drivers of global biodiversity loss. 
Photo Credit: Matthias Behr

The conversion of natural forests and grasslands to intensive agriculture and livestock is the biggest cause of global biodiversity loss. The next biggest drivers are the exploitation of wildlife through fishing, logging, trade and hunting - and then pollution. Climate change ranks fourth on land so far but second in oceans. This is the main result of an international study led by researchers from Universidad Nacional de Córdoba (UNC) in Argentina, Helmholtz Centre for Environmental Research (UFZ), German Centre for Integrative Biodiversity Research (iDiv) and the Natural History Museum London. The study, published in Science Advances, demonstrates that fighting climate change alone will not be enough to prevent the further loss of biodiversity.

Whilst climate change has rightly attracted attention for its catastrophic consequences for the natural world, it is currently only the fourth largest driver of biodiversity loss on land, followed by invasive alien species in fifth place. "This major new study, published during the COP27 climate summit, demonstrates clearly that fighting climate change alone will not be enough to prevent the further loss of biodiversity, and with it our future", says Dr Nicolas Titeux, one of the two first authors. "The various direct drivers should be addressed with similar ambition as the climate crisis and as a whole." Titeux currently works at the Luxembourg Institute of Science and Technology but conducted the major part of the study at the UFZ with funding from iDiv.

Robots are taking over jobs, but not at the rate you might think

The study found that robots aren’t replacing humans at the rate most people think, but people are prone to exaggerate the rate of robot takeover.
Photo Credit: Jaren Wilkey, BYU Photo

It’s easy to believe that robots are stealing jobs from human workers and drastically disrupting the labor market; after all, you’ve likely heard that chatbots make more efficient customer service representatives and that computer programs are tracking and moving packages without the use of human hands.

But there’s no need to panic about a pending robot takeover just yet, says a new study from BYU sociology professor Eric Dahlin. Dahlin’s research found that robots aren’t replacing humans at the rate most people think, but people are prone to severely exaggerate the rate of robot takeover.

The study, recently published in Socius: Sociological Research for a Dynamic World, found that only 14% of workers say they’ve seen their job replaced by a robot. But those who have experienced job displacement due to a robot overstate the effect of robots taking jobs from humans by about three times.

To understand the relationship between job loss and robots, Dahlin surveyed nearly 2,000 individuals about their perceptions of jobs being replaced by robots. Respondents were first asked to estimate the percentage of employees whose employers have replaced jobs with robots. They were then asked whether their employer had ever replaced their job with a robot.

Previously unknown monumental temple discovered near the Tempio Grande in Vulci

Archaeologists and other colleagues uncover the walls of the Etruscan temple in Vulci.
Photo Credit: Mariachiara Franceschini

Archeologists from the universities of Freiburg and Mainz identify one of the largest known sacred buildings of the Etruscans

An interdisciplinary team headed by archeologists Dr. Mariachiara Franceschini of the University of Freiburg and Paul P. Pasieka of the University of Mainz has discovered a previously unknown Etruscan temple in the ancient city of Vulci, which lies in the Italian region of Latium. The building, which is 45 meters by 35 meters, is situated west of the Tempio Grande, a sacred building which was excavated back in the 1950s. Initial examination of the strata of the foundation of the northeast corner of the temple and the objects they found there led the researchers to date the construction of the temple towards the end of the sixth or beginning of the fifth century BCE. “The new temple is roughly the same size and on a similar alignment as the neighboring Tempio Grande, and was built at roughly the same Archaic time,” explains Franceschini. “This duplication of monumental buildings in an Etruscan city is rare, and indicates an exceptional finding,” adds Pasieka. The team discovered the temple when working on the Vulci Cityscape project, which was launched in 2020 and aimed to research the settlement strategies and urbanistic structures of the city of Vulci. Vulci was one of the twelve cities of the Etruscan federation and in pre-Roman times was one of the most important urban centers in what is now Italy.

Gut parasites may increase onward transmission of respiratory bugs in rabbits

Bordatella bronchiseptica shedding on BG-blood agar petri dishes. Examples of (a) supershedding event and (b) average shedding event.
Credit: Isabella Cattadori, Penn State

Rabbits co-infected with a respiratory bacterial infection and one or more gut helminth parasites are more likely to shed bacteria that can infect others, according to a report led by researchers at Penn State and published today in the journal eLife.

The study suggests that co-infection is an important source of variation in pathogen shedding between individual animals and could influence how likely a disease is to spread. Species similar to the ones used in this study infect humans and while the study was done in rabbits it has broad implications for human populations.

Individual variation in pathogen transmission can increase the basic reproduction number — the R value — of a pathogen, and determine whether an infection will spread or stutter and quickly fade away. One of the causes of this variation is differences in the amount and duration of pathogen shedding, as some individuals shed more and for longer than others — so-called super-shedders. Co-infection with other pathogens is thought to contribute to variation in host infection, and so transmission, because of interactions between pathogen species and the immune response they trigger.

Injections for diabetes, cancer could become unnecessary

Young woman injecting insulin
Photo Credit: Pavel Danilyuk

Researchers at UC Riverside are paving the way for diabetes and cancer patients to forget needles and injections, and instead take pills to manage their conditions.

Some drugs for these diseases dissolve in water, so transporting them through the intestines, which receive what we drink and eat, is not feasible. As a result, these drugs cannot be administered by mouth. However, UCR scientists have created a chemical “tag” that can be added to these drugs, allowing them to enter blood circulation via the intestines.

The details of how they found the tag, and demonstrations of its effectiveness, are described in a new Journal of the American Chemical Society paper.

The tag is composed of a small peptide, which is like a protein fragment. “Because they are relatively small molecules, you can chemically attach them to drugs, or other molecules of interest, and use them to deliver those drugs orally,” said Min Xue, UCR chemistry professor who led the research.

Xue’s laboratory was testing something unrelated when the researchers observed these peptides making their way into cells.

The Cone Nebula as seen by the VLT

The Cone Nebula is part of a star-forming region of space, NGC 2264, about 2500 light-years away. Its pillar-like appearance is a perfect example of the shapes that can develop in giant clouds of cold molecular gas and dust, known for creating new stars. This dramatic new view of the nebula was captured with the FOcal Reducer and low dispersion Spectrograph 2 (FORS2) instrument on ESO’s Very Large Telescope (VLT), and released on the occasion of ESO’s 60th anniversary.
Full Size Image
Credit: ESO

For the past 60 years the European Southern Observatory (ESO) has been enabling scientists worldwide to discover the secrets of the Universe. We mark this milestone by bringing you a spectacular new image of a star factory, the Cone Nebula, taken with ESO’s Very Large Telescope (VLT).

On 5 October 1962 five countries signed the convention to create ESO. Now, six decades later and supported by 16 Member States and strategic partners, ESO brings together scientists and engineers from across the globe to develop and operate advanced ground-based observatories in Chile that enable breakthrough astronomical discoveries.​

On the occasion of ESO’s 60th anniversary we are releasing this remarkable new image of the Cone Nebula, captured earlier this year with one of ESO’s telescopes and selected by ESO staff. This is part of a campaign marking ESO's 60th anniversary and taking place in late 2022, both on social media under the #ESO60years hashtag, and with local events in the ESO Member States and other countries.

Growing pure nanotubes is a stretch, but possible

There are dozens of varieties of nanotubes, each with a characteristic diameter and structural twist, or chiral angle. Carbon nanotubes are grown on catalytic particles using batch production methods that produce the entire gamut of chiral varieties, but Rice University scientists have come up with a new strategy for making batches with a single, desired chirality. Their theory shows chiral varieties can be selected for production when catalytic particles are drawn away at specific speeds by localized feedstock supply. The illustration depicts this and an analogous process 19th-century scientists used to describe the evolution of giraffes’ long necks due to the gradual selection of abilities to reach progressively higher for food.
Credit: Illustrations by Ksenia Bets/Rice University

Like a giraffe stretching for leaves on a tall tree, making carbon nanotubes reach for food as they grow may lead to a long-sought breakthrough.

Materials theorists Boris Yakobson and Ksenia Bets at Rice University’s George R. Brown School of Engineering show how putting constraints on growing nanotubes could facilitate a “holy grail” of growing batches with a single desired chirality.

Their paper in Science Advances describes a strategy by which constraining the carbon feedstock in a furnace would help control the “kite” growth of nanotubes. In this method, the nanotube begins to form at the metal catalyst on a substrate, but lifts the catalyst as it grows, resembling a kite on a string.

Carbon nanotube walls are basically graphene, its hexagonal lattice of atoms rolled into a tube. Chirality refers to how the hexagons are angled within the lattice, between 0 and 30 degrees. That determines whether the nanotubes are metallic or semiconductors. The ability to grow long nanotubes in a single chirality could, for instance, enable the manufacture of highly conductive nanotube fibers or semiconductor channels of transistors.

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