Innovative plankton monitoring tool holds key to assessing health of ocean life

Researchers from the University of Plymouth have helped to create a free, online tool to make complex plankton datasets easier and more accessible for all.

The Plankton Lifeform Extraction Tool (PLET) brings together separate plankton datasets into one central database and formats the data into pre-defined lifeforms, making it easier for marine biologists to access robust, reliable plankton data.

This data will give a more accurate picture of the spatial and temporal location of ocean plankton and in turn provide data and critical information to inform policy, public interest and scientific discovery.

The online tool, hosted by the Archive for Marine Species and Habitats Data (DASSH) was developed by researchers from 15 partners across Europe.

Lead author Dr Clare Ostle, from the Marine Biological Association, said:

“This has been many years in the making, and it’s great to see it come together. Plankton underpin so many important processes in the marine world, and making that data more user-friendly and accessible is key to answering important questions.”

Plankton form the base of the marine food web, help to regulate the ocean chemistry and provide approximately half of the world’s oxygen.

Because plankton have short life cycles, drift freely in the ocean and have wide distributions, they are sensitive indicators to climate change, and therefore play an important role for scientists monitoring changes in ocean biodiversity.

Although there are a number of programs that monitor plankton, the lack of direct comparison between datasets means that assessing plankton changes has been difficult and limited.

Melting glaciers may produce thousands of kilometers of new Pacific salmon habitat

Sockeye salmon (Photo: Freshwaters Illustrated)

Retreating glaciers in the Pacific mountains of western North America could produce around 6,150 kilometers of new Pacific salmon habitat by the year 2100, according to a new study.

Scientists have ‘peeled back the ice’ from 46,000 glaciers between southern British Columbia and south-central Alaska to look at how much potential salmon habitat would be created when underlying bedrock is exposed and new streams flow over the landscape.

Modeling glacier retreat under different climate change scenarios, researchers discovered that, under a moderate temperature increase, the glaciers could reveal potential new Pacific salmon habitat nearly equal to the length of the Mississippi River (6,275 km).

Desirable for salmon, in this case, means low-gradient streams (less than 10% incline) connected to the ocean with retreating glaciers at their headwaters. The team discovered that 315 of the glaciers examined met this criteria.

The international team, led by researchers at Simon Fraser University (Canada) with the University of Birmingham and other organizations, published their findings today in Nature Communications.

Lead author, Simon Fraser University spatial analyst Dr. Kara Pitman comments: “We predict that most of the emerging salmon habitat will occur in Alaska and the transboundary region, at the British Columbia‒Alaska border, where large coastal glaciers still exist. The Gulf of Alaska sub-region is predicted to see the most gains—a 27% increase in salmon-accessible habitat by 2100.

For the first time, civil /commercial operators in the U.S can purchase new Black Hawk aircraft

The first-of-type S-70M Black Hawk helicopter departs from the Sikorsky Training Academy in Florida Nov. 18 having received the FAA’s Certificate of Airworthiness.
Source/Credit: Lockheed Martin Corporation

The Federal Aviation Administration (FAA) has completed its certification of the S-70M Black Hawk helicopter — a new type designation — by issuing Sikorsky, a Lockheed Martin company (NYSE: LMT) a Restricted Category Special Airworthiness Certificate. FAA certification, and the establishment of a pilot type rating, are expected to broaden the market for the military-designed helicopter by allowing civil and commercial operators in the United States to purchase new Black Hawk aircraft direct from the factory.

“With type certification, new production S-70M Black Hawk helicopters in the latest configuration are available to the U.S. commercial/civil market for the first time,” said Jason Lambert, vice president of Sikorsky Global Commercial & Military Systems. “Internationally, where the FAA restricted category is not widely accepted, we can now discuss with other civil aviation authorities the potential of validating the aircraft for challenging civil operations in their countries’ airspace.”

“We thank the FAA for its rigorous evaluation of the first S-70M aircraft, and FlightSafety International for its partnership to upgrade an S-70i™ flight simulator and training curriculum to S-70M FAA standards,” he said. “We also congratulate and welcome our first S-70M customer, San Diego Gas & Electric, which requires the rugged design and lift capacity of the Black Hawk helicopter to perform the demanding aerial firefighting mission.”

Iron integral to the development of life on Earth, and the possibility of life on other planets

Early Earth on the left, had seas infused with life-enhancing iron, whereas Earth today, seen on the right, does not.
Image credit: Mark A. Garlick / markgarlick.com

Iron integral to the development of life on Earth – and the possibility of life on other planets

Researchers at the University of Oxford uncover the importance of iron for the development of complex life on Earth – which also may hint at the likelihood of complex life on other planets.

Iron is an essential nutrient that almost all life requires to grow and thrive. Iron’s importance goes all the way back to the formation of the planet Earth, where the amount of iron in the Earth’s rocky mantle was ‘set’ by the conditions under which the planet formed and went on to have major ramifications for how life developed. Now, scientists at the University of Oxford have uncovered the likely mechanisms by which iron influenced the development of complex life forms, which can also be used to understand how likely (or unlikely) advanced life forms might be on other planets. The work was published today in PNAS.

‘The initial amount of iron in Earth’s rocks is ‘set’ by the conditions of planetary accretion, during which the Earth’s metallic core segregated from its rocky mantle,’ says co-author Jon Wade, Associate Professor of Planetary Materials at the Department of Earth Sciences, University of Oxford. ‘Too little iron in the rocky portion of the planet, like the planet Mercury, and life is unlikely. Too much, like Mars, and water may be difficult to keep on the surface for times relevant to the evolution of complex life.’

Study untangles mitochondria to reap rewards of exercise

New research has uncovered how mitochondria – the energy powerhouse of our cells implicated in devastating mitochondrial disease, type 2 diabetes and cancers – respond to exercise training in unprecedented detail.

 joint study between the University of Melbourne and Victoria University, with collaborators at the German Diabetes Center, Monash University, and the Murdoch Children’s Research Institute, have successfully linked minutes of exercise to specific mitochondrial changes that support improved metabolism.

In work published in Nature Communications, the University of Melbourne’s Dr Stroud from the School of Biomedical Sciences, and colleagues detail how they used state-of-the art equipment at the University of Melbourne’s Bio21 Molecular Science and Biotechnology Institute’s Mass Spectrometry and Proteomics Faculty to analyze in detail how our muscles respond to exercise.

While mitochondria are hugely important as they convert sugars, fats and protein into energy used for muscle contraction, cell growth and brain activity among other things, maintaining mitochondrial health is critical not just to various debilitating disease states where mitochondrial function is impaired, but also the quality of life of otherwise healthy people.

The team were able to discover ten times more mitochondrial proteins that respond to exercise training than documented in previous studies.

Researchers examine neurotoxin from a Black Widow

The team used cryo-electron microscopy to reveal the structures of toxins specific to insects and crustaceans (right) from the Black Widow (left).
© Photo: nickybay.com; Figure: Gatsogiannis team

Phobias are often irrational by nature – especially in the case of spiders, as these creatures are usually more afraid of humans than vice-versa. But: some species are a force to be reckoned with – for example, the Latrodectus spider, more commonly known as the Black Widow. It catches its prey by using venom – to be precise, latrotoxins (LaTXs), a subclass of neurotoxins, or nerve poisons. A bite from a Black Widow can be fatal for humans. 

The exact structure of the nerve poison was previously unclear, but Prof. Christos Gatsogiannis from the Institute of Medical Physics and Biophysics at Münster University investigated the substance – not only because of its uniqueness, but also with a view to possible medical applications. Using cryo-EM, and in collaboration with Gatsogiannis’ former colleagues at the Max Planck Institute in Dortmund and with researchers at Jacobs University Bremen, the team of Münster researchers succeeded in explaining the first structure of a latrotoxin. The team’s findings have now been published in the Nature Communications journal.

Neurotoxins are probably known to many non-specialists – in the form of botox, which is often used in cosmetic surgery. The Black Widow’s poison, however, has anything but a “beautifying” effect: LaTX was developed by nature primarily in order to immobilize insects – or simply kill them straight off. In the process, the toxins dock onto specific receptors on the surface of nerve cells and cause neurotransmitters to be released, for example through a calcium channel. As a result of the constant inflow of calcium ions into the cell, transmitters are given off which lead to seizures.

Primates vs cobras: how our last common ancestor built venom resistance

Associate Professor Bryan Fry

The last common ancestor of chimps, gorillas and humans developed an increased resistance toward cobra venom, according to University of Queensland-led research.

Scientists used animal-free testing techniques to show that African and Asian primates evolved resistance toward the venoms of large, daytime-active cobras and discovered that our last common ancestor with chimps and gorillas evolved even stronger resistance.

University of Queensland PhD candidate Richard Harris said African and Asian primates developed venom resistance after a long evolutionary arms race.

“As primates from Africa gained the ability to walk upright and dispersed throughout Asia, they developed weapons to defend themselves against venomous snakes, this likely sparked an evolutionary arms race and evolving this venom resistance,” Mr. Harris said.

“This was just one of many evolutionary defenses – many primate groups appear to also have developed excellent eyesight, which is thought to have aided them in detecting and defending themselves against venomous snakes.

“But Madagascan Lemurs and Central and South American monkeys, which live in regions that haven’t been colonized by or come in close contact with neurotoxic venomous snakes, didn’t evolve this kind of resistance to snake venoms and have poorer eyesight.

“It’s been long-theorized that snakes have strongly influenced primate evolution, but we now have additional biological evidence to support this theory.”

Sodium-based Material Yields Stable Alternative to Lithium-ion Batteries

Scientists at the University of Texas at Austin have developed a new sodium metal anode for rechargeable batteries (left) that resists the formation of dendrites, a common problem with standard sodium metal anodes (right) that can lead to shorting and fires. Images were taken with a scanning electron microscope.
Image credit: Yixian Wang/University of Texas at Austin.

University of Texas at Austin researchers have created a new sodium-based battery material that is highly stable, capable of recharging as quickly as a traditional lithium-ion battery and able to pave the way toward delivering more energy than current battery technologies.

For about a decade, scientists and engineers have been developing sodium batteries, which replace both lithium and cobalt used in current lithium-ion batteries with cheaper, more environmentally friendly sodium. Unfortunately, in earlier sodium batteries, a component called the anode would tend to grow needle-like filaments called dendrites that can cause the battery to electrically short and even catch fire or explode.

Migratory birds have lighter-colored feathers

As a result, the plumage absorbs less solar energy and thus prevents overheating during long flights

Migratory birds are specially adapted to find their way over extreme distances that represent remarkable tests of endurance. Now, researchers of the Max Planck Institute for Ornithology in Seewiesen and colleagues have discovered an unexpected way that migratory birds keep their cool during such arduous journeys: lighter-colored feathers.

"We found across nearly all species of birds, migratory species tend to be lighter colored than non-migratory species,” said Kaspar Delhey of the Max Planck Institute for Ornithology, Seewiesen, Germany. “We think that lighter plumage coloration is selected in migratory species because it reduces the risk of overheating when exposed to sunshine. Lighter surfaces absorb less heat than darker ones, as anybody wearing dark clothes on a sunny day can attest! This would be particularly important for long-distance migrants that undertake extensive flights during which they cannot stop to rest in the shade.”

Delhey and colleagues had been studying the effects of climate on bird coloration. Their earlier studies showed that, in general, lighter colored birds are found where temperatures are high and there is little shade. Presumably that’s at least in part because the birds’ lighter plumage helps to keep them cooler in the hot sun. Around that same time, the researchers came across studies by others showing that some birds fly at much higher altitudes during the day compared to at night.

Trees are biggest methane 'vents' in wetland areas – even when they're dry

Image credit: Viviane Figueiredo Souza

Most of the methane gas emitted from Amazon wetlands regions is vented into the atmosphere via tree root systems – with significant emissions occurring even when the ground is not flooded, say researchers at the University of Birmingham.

In a study published in the Royal Society journal, Philosophical Transactions A, the researchers have found evidence that far more methane is emitted by trees growing on floodplains in the Amazon basin than by soil or surface water and this occurs in both wet and dry conditions.

Methane is the second most important greenhouse gas and much of our atmospheric methane comes from wetlands. A great deal of research is being carried on into exactly how much methane is emitted via this route, but models typically assume that the gas is only produced when the ground is completely flooded and underwater.

In wetland areas where there are no trees, methane would typically be consumed by the soil on its way to the surface, but in forested wetland areas, the researchers say the tree roots could be acting as a transport system for the gas, up to the surface where it vents into the atmosphere from the tree trunks.

Methane is able to escape via this route even when it is produced in soil and water that is several meters below ground level.

This would mean that existing models could be significantly underestimating the likely extent of methane emissions in wetland areas such as the Amazon basin.