Compounds from soybeans may improve animal health

The sprouting soybeans, in front, have been inoculated with a pathogen to trigger production of glyceollins, which have antimicrobial properties. Scaling up these lab experiments at the POET Bioproducts Institute may lead to soybeans that are rich in glyceollins being integrated into animal feed to help prevent disease and reduce the need for antibiotics.

Antimicrobial compounds that soybean plants produce when threatened by insects, diseases and even drought may help animals stay healthy, thereby reducing the need for antibiotics.

“When a soybean is attacked by a pathogen, the plant produces phytochemicals called glyceollins as a defense mechanism,” explained assistant professor Bishnu Karki of South Dakota State University’s Department of Biology and Microbiology. Her research group has identified pathogens and lab-scale processes to trigger production of glyceollins and begun assessing soybean varieties to see which produce higher levels of the antimicrobial compounds.

“Animals, such as pigs and poultry, already consume diets high in soybeans and could benefit from the phytochemical’s antimicrobial properties,” Karki said, pointing out scientists are studying the impact of glyceollins on human health, specifically in relation to cancer, inflammation and cardiovascular diseases.

Karki’s research is supported by U.S. Department of Agriculture Hatch Act funding through the South Dakota Agricultural Experiment Station. Two master’s students and several undergraduates have also worked on the project.

Scientists Find SARS CoV-2-Related Coronaviruses in Cambodian Bats from 2010

Rhinolophus shameli Credit: Ben Hayes 

A team of scientists have identified coronaviruses closely related to SARS-CoV-2 from two bats sampled in Cambodia more than a decade ago. The discovery described in the journal Nature Communications, along with the recent detection of the closest ancestors of SARS-CoV-2 known to date in cave-dwelling bats in Laos, indicates that SARS-CoV-2-related viruses that cause COVID-19 have a much wider geographic distribution than previously reported and further supports the hypothesis that the pandemic originated via spillover of a bat-borne virus.

Scientists used metagenomic sequencing to identify the nearly identical viruses in two Shamel’s horseshoe bats (Rhinolophus shameli) originally sampled in 2010. The finding suggests that SARS-CoV-2 related viruses likely circulate via multiple Rhinolophus species.

The authors state that the current understanding of the geographic distribution of the SARS-CoV and SARS-CoV-2 lineages possibly reflects a lack of sampling in Southeast Asia, or at least across the Greater Mekong Subregion, which encompasses Myanmar, Laos, Thailand, Cambodia and Vietnam, as well as the Yunnan and Guanxi provinces of China.

Two-meter COVID-19 rule is ‘arbitrary measurement’ of safety

Credit: University of Cambridge

A team of engineers from the University of Cambridge used computer modeling to quantify how droplets spread when people cough. They found that in the absence of masks, a person with COVID-19 can infect another person at a two-meter distance, even when outdoors.

The team also found that individual coughs vary widely, and that the ‘safe’ distance could have been set at anywhere between one to three or more meters, depending on the risk tolerance of a given public health authority.

The results, published in the journal Physics of Fluids, suggest that social distancing is not an effective mitigation measure on its own, and underline the continued importance of vaccination, ventilation and masks as we head into the winter months in the northern hemisphere.

Despite the focus on hand-washing and surface cleaning in the early days of the pandemic, it’s been clear for nearly two years that COVID-19 spreads through airborne transmission. Infected people can spread the virus through coughing, speaking or even breathing, when they expel larger droplets that eventually settle or smaller aerosols that may float in the air.

“I remember hearing lots about how COVID-19 was spreading via door handles in early 2020, and I thought to myself if that were the case, then the virus must leave an infected person and land on the surface or disperse in the air through fluid mechanical processes,” said Professor Epaminondas Mastorakos from Cambridge’s Department of Engineering, who led the research.

Global warming, not just drought, drives bark beetles to kill more ponderosa pines

Outbreaks of western pine beetles are decimating ponderosa pines
 in California’s Sierra Nevada and across the West.
Credit: Los Alamos National Laboratory 

In California’s Sierra Nevada, western pine beetle infestations amped up by global warming were found to kill 30% more ponderosa pine trees than the beetles do under drought alone. A new supercomputer modeling study hints at the grim prospect of future catastrophic tree die-offs and offers insights for mitigating the combined risk of wildfires and insect outbreaks.

“Forests represent a crucial buffer against warming climate and are often touted as an inexpensive mitigation strategy against climate change,” said Zachary Robbins, a researcher at Los Alamos National Laboratory, graduate student at North Carolina State University, and lead author of the paper on beetles and ponderosa pine tree die-offs. “Our research shows that warming shortens the time between beetle generations, supercharging beetle population growth. That can then spur catastrophic mortality in forest systems during drought in the Sierra Nevada and throughout the Western United States.”

In the recently published study in Global Change Biology, Robbins and his collaborators developed a new modeling framework to assess the risk western pine beetles, or bark beetles, pose in many forest ecosystems under climate change. If the effects of compromised tree defenses (15% to 20%) and increased bark beetle populations (20%) are additive, the team determined that 35% to 40% more ponderosa pines would die from beetle attacks for each degree Celsius of warming.

“Our study is the first to attribute a level of tree mortality to the direct effect of warming on bark beetles, using a model that captures both beetle reproduction and development rates and host stress,” Robbins said. “We found that even slight increases in the number of annual generations of bark beetles due to warming can significantly increase tree mortality during drought.”

Turning a climate problem into a food solution

Like a mirage on the horizon, an innovative process for converting a potent greenhouse gas into a food security solution has been stalled by economic uncertainty. Now, a first-of-its-kind Stanford University analysis evaluates the market potential of the approach, in which bacteria fed captured methane grow into protein-rich fishmeal. The study, published Nov. 22 in Nature Sustainability, finds production costs involving methane captured from certain sources in the U.S. are lower than the market price for conventional fishmeal. It also highlights feasible cost reductions that could make the approach profitable using other methane sources and capable of meeting all global fishmeal demand.

“Industrial sources in the U.S. are emitting a truly staggering amount of methane, which is uneconomical to capture and use with current applications,” said study lead author Sahar El Abbadi, who conducted the research as a graduate student in civil and environmental engineering.

“Our goal is to flip that paradigm, using biotechnology to create a high-value product,” added El Abbadi, who is now a lecturer in the Civic, Liberal and Global Education program at Stanford.

Mystery of high-performing solar cell materials revealed in stunning clarity

Artistic representation of electrons funneling into
high quality areas of perovskite material 
Credit: Alex T. at Ella Maru Studios

The most commonly used material for producing solar panels is crystalline silicon, but achieving efficient energy conversion requires an energy-intensive and time-consuming production process to create a highly ordered wafer structure.

In the last decade, perovskite materials have emerged as promising alternatives to silicon.

The lead salts used to make perovskites are much more abundant and cheaper to produce than crystalline silicon, and they can be prepared in liquid ink that is simply printed to produce a film of the material. They also show great potential for other applications, such as energy-efficient light-emitting diodes (LEDs) and X-ray detectors.

The performance of perovskites is surprising. The typical model for an excellent semiconductor is a highly ordered structure, but the array of different chemical elements in perovskites creates a much ‘messier’ landscape.

This messiness causes defects in the material that lead to tiny ‘traps’, which typically reduce performance. But despite the presence of these defects, perovskite materials still show efficiency levels comparable to their silicon alternatives.

Islands are biodiversity hotspots yet, paradoxically, are also extinction hotspots

Photo by Tom Fisk from Pexels

Scientific Frontline: "At a Glance" Summary

• Main Discovery: Island conservation efforts are systematically failing due to 33 distinct barriers, primarily occurring at the organizational level, which prevent nations from meeting critical biodiversity targets despite islands being global extinction epicenters.
• Methodology: Researchers conducted in-depth, semi-structured interviews with 32 conservation practitioners working across the Western Indian Ocean (specifically Seychelles, Mauritius, Comoros, and Madagascar) to identify and categorize obstacles to effective ecosystem management.
• Key Data: The study classified 55% of the identified barriers as organizational issues, with the most frequent causes being limited staff capacity (23.5%), lack of government coordination (21.6%), and insufficient financial resources (21.6%).
• Significance: This research highlights a "fragmentation of efforts" where a lack of data sharing and collaboration exacerbates the vulnerability of island ecosystems, which house 20% of global biodiversity but account for 75% of known extinctions.
• Future Application: Proposed solutions include restructuring funding models to extend beyond standard 2-3 year cycles, creating dedicated data management positions, and establishing formal networks for inter-island collaboration to share successful strategies.
• Branch of Science: Conservation Science and Environmental Management
• Additional Detail: The study emphasizes that economic and social wellbeing in these regions is highly dependent on biodiversity, making the identified "implementation gap" a critical socio-economic risk as well as an ecological one.

Fundamental particles modelled in beam of light

Scientists at the University of Birmingham have succeeded in creating an experimental model of an elusive kind of fundamental particle called a skyrmion in a beam of light.

The breakthrough provides physicists with a real system demonstrating the behavior of skyrmions, first proposed 60 years ago by a University of Birmingham mathematical physicist, Professor Tony Skyrme.

Skyrme’s idea used the structure of spheres in 4-dimensional space to guarantee the indivisible nature of a skyrmion particle in 3 dimensions. 3D particle-like skyrmions are theorized to tell us about the early origins of the Universe, or about the physics of exotic materials or cold atoms. However, despite being investigated for over 50 years, 3D skyrmions have been seen very rarely in experiments. The most current research into skyrmions focuses on 2D analogues, which shows promise for new technologies.

In a new study, published in Nature Communications, the international collaboration between researchers at the University of Birmingham, Lancaster, Münster (Germany) and RIKEN (Japan) has demonstrated for the first time how skyrmions can be measured in three dimensions.

Justinianic Plague was nothing like flu and may have hit England before Constantinople

Detail of the mosaic of Justinianus I in the Basilica di San Vitale,
Ravenna, Italy 
Credit: Petar Milošević

‘Plague sceptics’ are wrong to underestimate the devastating impact that bubonic plague had in the 6th– 8th centuries CE, argues a new study based on ancient texts and recent genetic discoveries. The same study suggests that bubonic plague may have reached England before its first recorded case in the Mediterranean via a currently unknown route, possibly involving the Baltic and Scandinavia.

The Justinianic Plague is the first known outbreak of bubonic plague in west Eurasian history and struck the Mediterranean world at a pivotal moment in its historical development, when the Emperor Justinian was trying to restore Roman imperial power.

For decades, historians have argued about the lethality of the disease; its social and economic impact; and the routes by which it spread. In 2019-20, several studies, widely publicized in the media, argued that historians had massively exaggerated the impact of the Justinianic Plague and described it as an ‘inconsequential pandemic’. In a subsequent piece of journalism, written just before COVID-19 took hold in the West, two researchers suggested that the Justinianic Plague was ‘not unlike our flu outbreaks’.

In a new study, published in Past & Present, Cambridge historian Professor Peter Sarris argues that these studies ignored or downplayed new genetic findings, offered misleading statistical analysis and misrepresented the evidence provided by ancient texts.

Sarris says: “Some historians remain deeply hostile to regarding external factors such as disease as having a major impact on the development of human society, and ‘plague skepticism’ has had a lot of attention in recent years.”

How smart is an octopus?

Credit: University of Queensland

The unique brainpower of octopuses – known for their intelligence and Houdini-like escapes – has been revealed by University of Queensland researchers.

Dr Wen-Sung Chung from UQ’s Queensland Brain Institute is part of a team that studied four octopus species using MRI techniques to produce detailed 3D images for comparing their unique brain structures.

He said octopus brains varied, depending on where a species lived, when it was active and if it interacted with other animals.

“The octopus is a master of camouflage, capable of solving complex tasks and their cognitive ability is said to approach that of some small mammals,” Dr Chung said.

“We investigated four species, including one deep-sea octopus, one solitary nocturnal species and two different reef dwellers active during daylight.”

Dr Chung said the octopus found in deep waters had a smooth brain like marsupials and rodents, suited for its slow pace of life and limited interactions with other animals.

The reef octopuses had a significantly larger brain with some properties similar to primates, adapted for complex visual tasks and social interaction in a busy, well-lit environment.