. Scientific Frontline: Autonomous underwater robot discovers hidden coral reef “hotspots”

Wednesday, May 13, 2026

Autonomous underwater robot discovers hidden coral reef “hotspots”

CUREE (Curious Underwater Robot for Ecosystem Exploration) autonomous underwater vehicle navigates using information from its cameras and outstretched hydrophones to gather audio and visual information about a coral reef environment.
Photo Credit: Austin Greene, © Woods Hole Oceanographic Institution

Scientific Frontline: Extended "At a Glance" Summary
: CUREE (Curious Underwater Robot for Ecosystem Exploration)

The Core Concept: CUREE is an autonomous underwater vehicle that integrates real-time audio and high-resolution visual data to identify, quantify, and map fine-scale biodiversity hotspots within coral reef ecosystems.

Key Distinction/Mechanism: Unlike traditional human diver surveys, which are limited in spatial coverage and duration, CUREE operates autonomously for extended periods. It utilizes a novel sensing framework that synthesizes direct observations (visual and acoustic animal detection) with indirect inferences (environmental soundscapes and sentinel species tracking) to precisely map biological activity at the centimeter scale.

Major Frameworks/Components:

  • Passive Acoustic Sensing: Deployment of hydrophones to detect distant biological activity and broad environmental soundscapes, operating effectively even when organisms are camouflaged or hidden.
  • Visual Fish Surveys: Utilization of onboard cameras to capture short-range, information-rich visual streams for species-level identification and density quantification.
  • Sound-Guided Homing: Autonomous navigation directed by specific biological acoustic signatures (e.g., snapping shrimp or distinct fish calls) to locate previously unknown areas of interest from up to 80 meters away.
  • Sentinel Species Tracking: Autonomous behavioral tracking of apex predators, such as barracudas, to identify localized ecological hotspots based on the predator's interaction with its habitat.

Branch of Science: Robotics, Marine Ecology, Marine Biology, Bioacoustics, Oceanography.

Future Application: The deployment of global fleets of autonomous, multi-modal sensor robots to continuously monitor uncharted reefs, assess fine-scale ecological changes due to warming oceans, and rapidly characterize vital habitats to inform targeted marine resource management.

Why It Matters: Coral reefs support roughly 25% of all marine species but face severe anthropogenic and climate-driven stressors. Accurately quantifying the sub-meter distribution of biological hotspots is critical for understanding reef resilience, assessing ecological health, and optimizing conservation interventions.

CUREE, an autonomous robot developed through the WHOI Reef Solutions Initiative, combines sound and video to map coral reef biodiversity hotspots in real time, giving scientists a powerful new way to study and protect vulnerable marine ecosystems.
Video Credit ©Woods Hole Oceanographic Institution

Researchers have developed an autonomous system for seeking out and mapping hotspots of biodiversity on coral reefs with unprecedented precision, offering a powerful new tool for studying and protecting some of the ocean’s most valuable ecosystems. The work, published in Science Robotics, demonstrates how combining audio and visual data in a single autonomous system can reveal where marine life concentrates, and why.

The researchers used CUREE (the Curious Underwater Robot for Ecosystem Exploration), a robotic vehicle developed as a part of the WHOI Reef Solutions Initiative, and combined CUREE’s cameras, hydrophones, and powerful onboard computers to analyze audio and visual signals in real time, enabling it to autonomously identify areas of higher biological activity at unprecedented resolution. Their work combines different types of observations—direct (mapping audio and visual detection of animals) and indirect (what can be inferred from environmental soundscapes or the behavior of sentinel species)—to identify where biological hotspots are most likely to be located. The system represents a breakthrough in the ability to identify, map, and monitor the fine-scale structure of reef biodiversity, a key part of understanding reef health and resilience.

“We know that biodiversity on reefs isn’t distributed uniformly,” said Seth McCammon, a WHOI roboticist and lead author of the study. “But until now we haven’t really been able to reliably quantify that by finding these patchy hotspots, mapping them at the centimeter scale, and measuring just how active they really are. Developing this capability is going to be critical to helping biologists get a deeper understanding of reef ecology moving forward.”

Coral reefs, which occupy less than 0.01% of the ocean yet support roughly one-quarter of all marine species, are under mounting stress from warming ocean water, disease, overfishing, and coastal development. This biodiversity clusters in localized hotspots—areas of intense biological activity that are critical for feeding, shelter, and reproduction. By resolving biodiversity patterns at submeter scales and linking them to habitat features such as reef structure, scientists will be better positioned to understand the processes that sustain reef ecosystems.

WHOI scientist and WARP Lab lead Yogesh Girdhar tests the CUREE (Curious Underwater Robot for Ecosystem Exploration) autonomous underwater vehicle in the U.S. Virgin Islands in November 2021. Members of the WARP Lab designed CUREE to navigate and sense complex coral reef environments autonomously to identify biodiversity hotspots. (Photo by Dan Mele © Woods Hole Oceanographic Institution)

Unlike traditional reef surveys conducted by trained divers, which are costly, limited in coverage, and potentially hazardous, CUREE can operate autonomously for hours at a time, precisely localize itself on the reef, and collect rich datasets over larger areas and longer periods. “That does not mean CUREE is a replacement for human observation of a reef,” said Yogesh Girdhar, the project principal investigator and a roboticist who led the development of CUREE at WHOI’s WARP Lab. “Instead, it’s meant to augment those capabilities and do things a human simply can’t.”

The robot uses a novel framework that integrates these multiple sensing techniques through four complementary behaviors: visual fish surveys, acoustic mapping, sound-guided homing, and tracking of key “sentinel” species. Together, these behaviors allow the system not only to map where biodiversity is concentrated but also to actively seek out new hotspots—even in unexplored and highly complex reef environments.

In field trials conducted over three expeditions between 2022 and 2024 to a healthy reef in the U.S. Virgin Islands known as Joel’s Shoal, the robot consistently identified the same hotspot: an area surrounding a large pillar coral structure. Visual surveys of the reef, which is named after Joel Llopiz, the WHOI biologist who discovered the reef and who passed away in January, revealed fish densities nearly 25 times higher near the feature compared to the rest of the reef, while acoustic data confirmed elevated biological activity over a much larger area.

In particular, the study highlights the power of combining audio and visual information underwater. Passive acoustic sensing can detect animal activity tens of meters away—even when organisms are hidden or camouflaged—but the reef environment is very noisy, making it difficult to make precise maps of biological activity using sound alone. Cameras provide detailed, species-level information, but only over short ranges. By combining these data streams, the robot can detect distant activity with sound and then verify it with close-up visual observations.

“In some sense, they’re almost a perfect complement for each other,” said McCammon. “Passive acoustics gives you a broad sense of the environment, while vision is short-range but is a really information-rich data stream.”

The system can also home in on specific biological sounds, such as snapping shrimp or species of fish known to make distinct calls, allowing it to navigate directly toward areas of interest without prior knowledge of the reef. In controlled experiments, the robot successfully tracked sound sources from distances of up to 80 meters and autonomously converged on natural reef hotspots over distances of 30 meters.

In another demonstration, the robot followed a barracuda—a top predator critical to the health of the reef ecosystem—as it moved through its environment to identify a hotspot. Researchers propose this method of autonomously observing where the sentinel species repeatedly returns as another way to identify locations of ecological importance, offering insights into how predators interact with their surroundings.

Ultimately, the researchers envision fleets of such robots deployed globally to explore and monitor reefs that remain largely uncharted. By rapidly finding and characterizing biodiversity hotspots, the technology could help guide conservation decisions, prioritize protection efforts, and track ecosystem changes in a warming ocean.

“As coral reefs face unprecedented challenges, we need smarter, faster ways to understand where life persists and why, so conservationists and resource managers can focus their attention where it’s needed most,” said Girdhar. “Autonomous systems like this can help us find—and protect—the most vital parts of these ecosystems before it’s too late.”

Published in journal: Science Robotics

TitleAutonomous seeking and mapping coral reef biodiversity hotspots with a multimodal AUV

Authors: Seth McCammon, Levi Cai, Daniel Yang, John Walsh, John D. Cast, T. Aran Mooney, Yogesh Girdhar

Source/CreditWoods Hole Oceanographic Institution

Reference Number: tech051326_01

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